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How stable are occurrences GBIF ids
by Nicolas Noé 11 Oct '21

11 Oct '21

Hello, Context: We are currently developing an Early Alert system for invasive species where all data transits through GBIF: - one one side, we are helping multiple data providers to push their observations to GBIF at a high frequency (probably daily) - on the other side, we have a web application <https://github.com/riparias/early-warning-webapp> that allows users to be alerted of specific species in specific locations. To do so, that web applicatio*n refreshes its internal database daily, by dropping and recreating all occurrences based on an automated GBIF data download*. Data in the gbifId field is used as a long-term occurrence identifier in this web application. It is crucial for our system that we can unambiguously distinguish new occurrences from existing occurrences that were recently republished (and maybe updated), and also detect occurrences that have been updated in the source dataset. Finally, the question: in the GBIF infrastructure, when exactly is a new occurrence Gbif ID issued (vs reused). Is it just a matter of following the publisher's occurrenceID, or is the algorithm that chooses Gbif IDs more complex? Or, more practically: what should I say to our data providers to guarantee all new occurrences they publish get a new gbifId and existing occurrences that get republished keep the same gbifId? I'd be also interested to know if you think the concept of using GBIF ids as stable identifiers in an external tool is fundamentally flawed (but I hope not!) Thanks a lot, don't hesitate to redirect me if this is not the right place to ask this question. Nicolas My apologies if this quest

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Fwd: Build failed in Jenkins: pipelines-la-dev #33
by Vicente J. Ruiz Jurado 07 Aug '20

07 Aug '20

Dear all: The last builds of ala-dev branch are falling because some docker container name is in use: {"message":"Conflict. The container name \"/ala-namematching-service-1\" is already in use by container I'm not sure if this is a temporarly issue that can be solved just removing it manually or probably we have to fix it in the build configuration. Doing a fast search, here some flags to remove (or not) the containers: https://stackoverflow.com/questions/48581627/fabrik8-delete-only-some-conta… Also some discussion about the dynamic ports and this issue https://github.com/fabric8io/docker-maven-plugin/issues/699#issuecomment-27… Bests regards, Vicente -------- Mensaje reenviado -------- Asunto: Build failed in Jenkins: pipelines-la-dev #33 Fecha: Thu, 6 Aug 2020 16:12:47 +0000 (UTC) De: builds <builds(a)gbif.org> Para: djtfmartin(a)gmail.com, Doug.Palmer(a)csiro.au, noreply(a)github.com, vjrj(a)ourproject.org See <https://builds.gbif.org/job/pipelines-la-dev/33/display/redirect?page=chang…> Changes: [vjrj] Added generated changelog with 'gbp dch' for automatic version control [vjrj] Readded debian specific ignores [vjrj] Ignoring some debian lintian warns [vjrj] Change obsolete bash completion directory [vjrj] Using mvn for self build. Reusing M2_REPO to faster deb build [vjrj] Ignoring debian generated file ------------------------------------------ [...truncated 2.18 MB...] [WARNING] - com.sun.research.ws.wadl.Request [WARNING] - com.sun.research.ws.wadl.package-info [WARNING] - com.sun.research.ws.wadl.ResourceType [WARNING] - com.sun.research.ws.wadl.Param [WARNING] - com.sun.research.ws.wadl.Link [WARNING] - com.sun.research.ws.wadl.Application [WARNING] - com.sun.research.ws.wadl.ParamStyle [WARNING] - com.sun.research.ws.wadl.Doc [WARNING] - 8 more... [WARNING] hadoop-common-2.6.0-cdh5.16.2.jar, occurrence-persistence-0.124.jar define 2093 overlapping classes: [WARNING] - org.apache.hadoop.io.compress.DecompressorStream [WARNING] - org.apache.hadoop.metrics.spi.AbstractMetricsContext [WARNING] - org.apache.hadoop.crypto.key.kms.LoadBalancingKMSClientProvider$14 [WARNING] - org.apache.hadoop.record.XmlRecordInput$Value [WARNING] - org.apache.hadoop.util.HeapSort [WARNING] - org.apache.hadoop.metrics.ganglia.GangliaContext31 [WARNING] - org.apache.hadoop.ha.protocolPB.HAServiceProtocolClientSideTranslatorPB$1 [WARNING] - org.apache.hadoop.util.ShutdownHookManager$2 [WARNING] - org.apache.hadoop.fs.crypto.CryptoFSDataInputStream [WARNING] - org.apache.hadoop.io.compress.DirectDecompressionCodec [WARNING] - 2083 more... [WARNING] jsp-2.1-6.1.14.jar, jasper-compiler-5.5.23.jar, jasper-runtime-5.5.23.jar define 1 overlapping classes: [WARNING] - org.apache.jasper.compiler.Localizer [WARNING] hsqldb-2.4.1.jar, hsqldb-1.8.0.10.jar define 176 overlapping classes: [WARNING] - org.hsqldb.util.DatabaseManagerSwing$2 [WARNING] - org.hsqldb.SessionInterface [WARNING] - org.hsqldb.util.DatabaseManagerSwing [WARNING] - org.hsqldb.persist.LockFile$UnexpectedFileNotFoundException [WARNING] - org.hsqldb.util.CommonSwing [WARNING] - org.hsqldb.lib.IntKeyHashMap [WARNING] - org.hsqldb.util.TableSorter$Arrow [WARNING] - org.hsqldb.lib.IntValueHashMap [WARNING] - org.hsqldb.util.DatabaseManagerSwing$5 [WARNING] - org.hsqldb.util.TableSorter$Directive [WARNING] - 166 more... [WARNING] jsp-2.1-6.1.14.jar, jasper-compiler-5.5.23.jar define 143 overlapping classes: [WARNING] - org.apache.jasper.compiler.Node$Nodes [WARNING] - org.apache.jasper.compiler.tagplugin.TagPlugin [WARNING] - org.apache.jasper.compiler.JspUtil [WARNING] - org.apache.jasper.xmlparser.MyEntityResolver [WARNING] - org.apache.jasper.compiler.Validator$TagExtraInfoVisitor [WARNING] - org.apache.jasper.compiler.SmapStratum [WARNING] - org.apache.jasper.compiler.SmapGenerator [WARNING] - org.apache.jasper.compiler.tagplugin.TagPluginContext [WARNING] - org.apache.jasper.compiler.JasperTagInfo [WARNING] - org.apache.jasper.EmbeddedServletOptions [WARNING] - 133 more... [WARNING] slf4j-log4j12-1.7.5.jar, logback-classic-1.2.3.jar define 3 overlapping classes: [WARNING] - org.slf4j.impl.StaticMarkerBinder [WARNING] - org.slf4j.impl.StaticLoggerBinder [WARNING] - org.slf4j.impl.StaticMDCBinder [WARNING] occurrence-persistence-0.124.jar, hadoop-auth-2.6.0-cdh5.16.2.jar define 39 overlapping classes: [WARNING] - org.apache.hadoop.security.authentication.server.PseudoAuthenticationHandler [WARNING] - org.apache.hadoop.security.authentication.client.AuthenticatedURL [WARNING] - org.apache.hadoop.security.authentication.client.AuthenticatedURL$Token [WARNING] - org.apache.hadoop.security.authentication.client.Authenticator [WARNING] - org.apache.hadoop.security.authentication.util.FileSignerSecretProvider [WARNING] - org.apache.hadoop.security.authentication.util.KerberosName$NoMatchingRule [WARNING] - org.apache.hadoop.security.authentication.util.KerberosName$Rule [WARNING] - org.apache.hadoop.security.authentication.server.AuthenticationHandler [WARNING] - org.apache.hadoop.security.authentication.util.RolloverSignerSecretProvider [WARNING] - org.apache.hadoop.security.authentication.util.KerberosName$BadFormatString [WARNING] - 29 more... [WARNING] hadoop-core-2.6.0-mr1-cdh5.16.2.jar, hadoop-mapreduce-client-common-2.6.0-cdh5.16.2.jar define 4 overlapping classes: [WARNING] - org.apache.hadoop.mapred.LocalJobRunner [WARNING] - org.apache.hadoop.mapred.MRVersion [WARNING] - org.apache.hadoop.mapred.LocalJobRunner$Job [WARNING] - org.apache.hadoop.mapred.LocalJobRunner$Job$MapTaskRunnable [WARNING] xml-apis-1.3.04.jar, batik-ext-1.7.jar define 8 overlapping classes: [WARNING] - org.w3c.dom.events.MouseEvent [WARNING] - org.w3c.dom.events.MutationEvent [WARNING] - org.w3c.dom.events.Event [WARNING] - org.w3c.dom.events.EventListener [WARNING] - org.w3c.dom.events.DocumentEvent [WARNING] - org.w3c.dom.events.EventException [WARNING] - org.w3c.dom.events.EventTarget [WARNING] - org.w3c.dom.events.UIEvent [WARNING] maven-shade-plugin has detected that some class files are [WARNING] present in two or more JARs. When this happens, only one [WARNING] single version of the class is copied to the uber jar. [WARNING] Usually this is not harmful and you can skip these warnings, [WARNING] otherwise try to manually exclude artifacts based on [WARNING] mvn dependency:tree -Ddetail=true and the above output. [WARNING] See http://maven.apache.org/plugins/maven-shade-plugin/ [INFO] Attaching shaded artifact. [INFO] [INFO] --- maven-jar-plugin:2.6:test-jar (attach-test-jar) @ pipelines --- [INFO] Building jar: <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/pipelines/targe…> [INFO] [INFO] --- maven-site-plugin:3.4:attach-descriptor (attach-descriptor) @ pipelines --- [INFO] [INFO] --- download-maven-plugin:1.6.0:wget (install-shapefiles) @ pipelines --- [WARNING] No signatures were supplied, skipping file validation [INFO] Got from cache: /var/lib/jenkins/.m2/repository/.cache/download-maven-plugin/pipelines-shapefiles.zip_32b5126a782a32c28abe5075c9af9241 [INFO] [INFO] --- download-maven-plugin:1.6.0:wget (install-shapefiles2) @ pipelines --- [WARNING] No signatures were supplied, skipping file validation [INFO] Got from cache: /var/lib/jenkins/.m2/repository/.cache/download-maven-plugin/sds-layers.tgz_58a56e633cf360ff2cb519e104732e9d [INFO] Expanding: /tmp/pipelines-shp/sds-layers.tgz into /tmp/pipelines-shp [INFO] [INFO] --- docker-maven-plugin:0.33.0:start (start) @ pipelines --- [INFO] DOCKER> [djtfmartin/biocache-pipelines-solr8:v3] "solr8": Start container ac576b4993c9 [ERROR] DOCKER> Error occurred during container startup, shutting down... [INFO] DOCKER> [djtfmartin/biocache-pipelines-solr8:v3] "solr8": Stop and removed container ac576b4993c9 after 0 ms [ERROR] DOCKER> I/O Error [Unable to create container for [charvolant/ala-namematching-service:v20200214-5] : {"message":"Conflict. The container name \"/ala-namematching-service-1\" is already in use by container \"4b7429e4ed5387f457ddc1a1d43f08e8fcdea3756c3861f6cc8c843627045920\". You have to remove (or rename) that container to be able to reuse that name."} (Conflict: 409)] Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds [INFO] [INFO] ------------------------------------------------------------------------ [INFO] Skipping Pipelines :: Parent [INFO] This project has been banned from the build due to previous failures. [INFO] ------------------------------------------------------------------------ [INFO] ------------------------------------------------------------------------ [INFO] Reactor Summary for Pipelines :: Parent 2.5.5-SNAPSHOT: [INFO] [INFO] Pipelines :: Parent ................................ SUCCESS [ 2.687 s] [INFO] Pipelines :: Tools ................................. SUCCESS [ 1.028 s] [INFO] Pipelines :: Tools :: Maven plugin ................. SUCCESS [ 5.797 s] [INFO] Pipelines :: Tools :: Elasticsearch tools .......... SUCCESS [01:07 min] [INFO] Pipelines :: Pipelines ............................. SUCCESS [ 0.958 s] [INFO] Pipelines :: Pipelines :: Common ................... SUCCESS [ 4.793 s] [INFO] Pipelines :: Sdks .................................. SUCCESS [ 0.987 s] [INFO] Pipelines :: Sdks :: Models ........................ SUCCESS [ 9.504 s] [INFO] Pipelines :: Sdks :: Parsers ....................... SUCCESS [ 27.005 s] [INFO] Pipelines :: Sdks :: Keygen ........................ SUCCESS [08:29 min] [INFO] Pipelines :: Sdks :: Core .......................... SUCCESS [ 55.367 s] [INFO] Pipelines :: Tools :: Archives converters .......... SUCCESS [01:34 min] [INFO] Pipelines :: Pipelines :: Beam-common .............. SUCCESS [ 21.964 s] [INFO] Pipelines :: Pipelines :: Export Occurrence into Avro SUCCESS [01:58 min] [INFO] Pipelines :: Pipelines :: Ingest-fragmenter ........ SUCCESS [03:07 min] [INFO] Pipelines :: Pipelines :: Ingest-transforms ........ SUCCESS [01:04 min] [INFO] Pipelines :: Pipelines :: Ingest-GBIF .............. SUCCESS [02:59 min] [INFO] Pipelines :: Pipelines :: Ingest-GBIF Java version . SUCCESS [02:21 min] [INFO] Pipelines :: Pipelines :: Ingest-GBIF Standalone ... SUCCESS [01:51 min] [INFO] Pipelines :: Example ............................... SUCCESS [ 0.975 s] [INFO] Pipelines :: Examples :: Transform ................. SUCCESS [ 45.347 s] [INFO] Pipelines :: Examples :: Metrics ................... SUCCESS [01:40 min] [INFO] Pipelines :: CLI ................................... SUCCESS [ 0.979 s] [INFO] Pipelines :: CLI :: Crawler ........................ SUCCESS [01:14 min] [INFO] Pipelines :: CLI :: Crawler IT ..................... SUCCESS [02:19 min] [INFO] Living Atlas Pipelines Parent POM .................. SUCCESS [ 1.264 s] [INFO] Living Atlas Pipelines ............................. FAILURE [02:15 min] [INFO] Living Atlas Migration tools ....................... SKIPPED [INFO] ------------------------------------------------------------------------ [INFO] BUILD FAILURE [INFO] ------------------------------------------------------------------------ [INFO] Total time: 35:57 min [INFO] Finished at: 2020-08-06T16:12:38Z [INFO] ------------------------------------------------------------------------ Waiting for Jenkins to finish collecting data [ERROR] Failed to execute goal io.fabric8:docker-maven-plugin:0.33.0:start (start) on project pipelines: I/O Error: Unable to create container for [charvolant/ala-namematching-service:v20200214-5] : {"message":"Conflict. The container name \"/ala-namematching-service-1\" is already in use by container \"4b7429e4ed5387f457ddc1a1d43f08e8fcdea3756c3861f6cc8c843627045920\". You have to remove (or rename) that container to be able to reuse that name."} (Conflict: 409) -> [Help 1] [ERROR] [ERROR] To see the full stack trace of the errors, re-run Maven with the -e switch. [ERROR] Re-run Maven using the -X switch to enable full debug logging. [ERROR] [ERROR] For more information about the errors and possible solutions, please read the following articles: [ERROR] [Help 1] http://cwiki.apache.org/confluence/display/MAVEN/MojoExecutionException [ERROR] [ERROR] After correcting the problems, you can resume the build with the command [ERROR] mvn <goals> -rf :pipelines [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pom.xml> to org.gbif.pipelines/pipelines-parent/2.5.5-SNAPSHOT/pipelines-parent-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/pom.xml> to org.gbif.pipelines/examples/2.5.5-SNAPSHOT/examples-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-transforms…> to org.gbif.pipelines/ingest-transforms/2.5.5-SNAPSHOT/ingest-transforms-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-transforms…> to org.gbif.pipelines/ingest-transforms/2.5.5-SNAPSHOT/ingest-transforms-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-transforms…> to org.gbif.pipelines/ingest-transforms/2.5.5-SNAPSHOT/ingest-transforms-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/elasticsearch-tools/p…> to org.gbif.pipelines/elasticsearch-tools/2.5.5-SNAPSHOT/elasticsearch-tools-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/elasticsearch-tools/t…> to org.gbif.pipelines/elasticsearch-tools/2.5.5-SNAPSHOT/elasticsearch-tools-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/elasticsearch-tools/t…> to org.gbif.pipelines/elasticsearch-tools/2.5.5-SNAPSHOT/elasticsearch-tools-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/pom.xml> to org.gbif.pipelines/pipelines/2.5.5-SNAPSHOT/pipelines-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/metrics/pom.xml> to org.gbif.pipelines/examples-metrics/2.5.5-SNAPSHOT/examples-metrics-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/metrics/target/exa…> to org.gbif.pipelines/examples-metrics/2.5.5-SNAPSHOT/examples-metrics-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/metrics/target/exa…> to org.gbif.pipelines/examples-metrics/2.5.5-SNAPSHOT/examples-metrics-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/metrics/target/exa…> to org.gbif.pipelines/examples-metrics/2.5.5-SNAPSHOT/examples-metrics-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/pom.xml> to org.gbif.pipelines/tools/2.5.5-SNAPSHOT/tools-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/pom.xml> to org.gbif.pipelines/sdks/2.5.5-SNAPSHOT/sdks-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/transform/pom.xml> to org.gbif.pipelines/examples-transform/2.5.5-SNAPSHOT/examples-transform-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/transform/target/e…> to org.gbif.pipelines/examples-transform/2.5.5-SNAPSHOT/examples-transform-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/transform/target/e…> to org.gbif.pipelines/examples-transform/2.5.5-SNAPSHOT/examples-transform-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/examples/transform/target/e…> to org.gbif.pipelines/examples-transform/2.5.5-SNAPSHOT/examples-transform-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/beam-common/pom.x…> to org.gbif.pipelines/beam-common/2.5.5-SNAPSHOT/beam-common-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/beam-common/targe…> to org.gbif.pipelines/beam-common/2.5.5-SNAPSHOT/beam-common-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/beam-common/targe…> to org.gbif.pipelines/beam-common/2.5.5-SNAPSHOT/beam-common-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/pom.xml> to au.org.ala/livingatlas/2.5.5-SNAPSHOT/livingatlas-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/pipelines/pom.x…> to au.org.ala/pipelines/2.5.5-SNAPSHOT/pipelines-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/pipelines/targe…> to au.org.ala/pipelines/2.5.5-SNAPSHOT/pipelines-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/pipelines/targe…> to au.org.ala/pipelines/2.5.5-SNAPSHOT/pipelines-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/pipelines/targe…> to au.org.ala/pipelines/2.5.5-SNAPSHOT/pipelines-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/archives-converters/p…> to org.gbif.pipelines/archives-converters/2.5.5-SNAPSHOT/archives-converters-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/archives-converters/t…> to org.gbif.pipelines/archives-converters/2.5.5-SNAPSHOT/archives-converters-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/archives-converters/t…> to org.gbif.pipelines/archives-converters/2.5.5-SNAPSHOT/archives-converters-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/archives-converters/t…> to org.gbif.pipelines/archives-converters/2.5.5-SNAPSHOT/archives-converters-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/pom.xml> to org.gbif.pipelines/cli/2.5.5-SNAPSHOT/cli-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-java/…> to org.gbif.pipelines/ingest-gbif-java/2.5.5-SNAPSHOT/ingest-gbif-java-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-java/…> to org.gbif.pipelines/ingest-gbif-java/2.5.5-SNAPSHOT/ingest-gbif-java-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-java/…> to org.gbif.pipelines/ingest-gbif-java/2.5.5-SNAPSHOT/ingest-gbif-java-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-java/…> to org.gbif.pipelines/ingest-gbif-java/2.5.5-SNAPSHOT/ingest-gbif-java-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/livingatlas/migration/pom.x…> to au.org.ala/migration/2.5.5-SNAPSHOT/migration-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/pipelines-maven-plugi…> to org.gbif.pipelines/pipelines-maven-plugin/2.5.5-SNAPSHOT/pipelines-maven-plugin-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/pipelines-maven-plugi…> to org.gbif.pipelines/pipelines-maven-plugin/2.5.5-SNAPSHOT/pipelines-maven-plugin-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/tools/pipelines-maven-plugi…> to org.gbif.pipelines/pipelines-maven-plugin/2.5.5-SNAPSHOT/pipelines-maven-plugin-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-stand…> to org.gbif.pipelines/ingest-gbif-standalone/2.5.5-SNAPSHOT/ingest-gbif-standalone-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-stand…> to org.gbif.pipelines/ingest-gbif-standalone/2.5.5-SNAPSHOT/ingest-gbif-standalone-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-stand…> to org.gbif.pipelines/ingest-gbif-standalone/2.5.5-SNAPSHOT/ingest-gbif-standalone-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif-stand…> to org.gbif.pipelines/ingest-gbif-standalone/2.5.5-SNAPSHOT/ingest-gbif-standalone-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/common/pom.xml> to org.gbif.pipelines/common/2.5.5-SNAPSHOT/common-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/common/target/com…> to org.gbif.pipelines/common/2.5.5-SNAPSHOT/common-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/common/target/com…> to org.gbif.pipelines/common/2.5.5-SNAPSHOT/common-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/core/pom.xml> to org.gbif.pipelines/core/2.5.5-SNAPSHOT/core-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/core/target/core-2.5.5…> to org.gbif.pipelines/core/2.5.5-SNAPSHOT/core-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/core/target/core-2.5.5…> to org.gbif.pipelines/core/2.5.5-SNAPSHOT/core-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-fragmenter…> to org.gbif.pipelines/ingest-fragmenter/2.5.5-SNAPSHOT/ingest-fragmenter-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-fragmenter…> to org.gbif.pipelines/ingest-fragmenter/2.5.5-SNAPSHOT/ingest-fragmenter-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-fragmenter…> to org.gbif.pipelines/ingest-fragmenter/2.5.5-SNAPSHOT/ingest-fragmenter-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-fragmenter…> to org.gbif.pipelines/ingest-fragmenter/2.5.5-SNAPSHOT/ingest-fragmenter-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/models/pom.xml> to org.gbif.pipelines/models/2.5.5-SNAPSHOT/models-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/models/target/models-2…> to org.gbif.pipelines/models/2.5.5-SNAPSHOT/models-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/models/target/models-2…> to org.gbif.pipelines/models/2.5.5-SNAPSHOT/models-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler/pom.xml> to org.gbif.pipelines/crawler/2.5.5-SNAPSHOT/crawler-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler/target/crawler-…> to org.gbif.pipelines/crawler/2.5.5-SNAPSHOT/crawler-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler/target/crawler.…> to org.gbif.pipelines/crawler/2.5.5-SNAPSHOT/crawler-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler/target/crawler-…> to org.gbif.pipelines/crawler/2.5.5-SNAPSHOT/crawler-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/keygen/pom.xml> to org.gbif.pipelines/keygen/2.5.5-SNAPSHOT/keygen-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/keygen/target/keygen-2…> to org.gbif.pipelines/keygen/2.5.5-SNAPSHOT/keygen-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/keygen/target/keygen-2…> to org.gbif.pipelines/keygen/2.5.5-SNAPSHOT/keygen-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/keygen/target/keygen-2…> to org.gbif.pipelines/keygen/2.5.5-SNAPSHOT/keygen-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler-integration-tes…> to org.gbif.pipelines/crawler-integration-tests/2.5.5-SNAPSHOT/crawler-integration-tests-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler-integration-tes…> to org.gbif.pipelines/crawler-integration-tests/2.5.5-SNAPSHOT/crawler-integration-tests-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/cli/crawler-integration-tes…> to org.gbif.pipelines/crawler-integration-tests/2.5.5-SNAPSHOT/crawler-integration-tests-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/parsers/pom.xml> to org.gbif.pipelines/parsers/2.5.5-SNAPSHOT/parsers-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/parsers/target/parsers…> to org.gbif.pipelines/parsers/2.5.5-SNAPSHOT/parsers-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/sdks/parsers/target/parsers…> to org.gbif.pipelines/parsers/2.5.5-SNAPSHOT/parsers-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif/pom.x…> to org.gbif.pipelines/ingest-gbif/2.5.5-SNAPSHOT/ingest-gbif-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif/targe…> to org.gbif.pipelines/ingest-gbif/2.5.5-SNAPSHOT/ingest-gbif-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif/targe…> to org.gbif.pipelines/ingest-gbif/2.5.5-SNAPSHOT/ingest-gbif-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/ingest-gbif/targe…> to org.gbif.pipelines/ingest-gbif/2.5.5-SNAPSHOT/ingest-gbif-2.5.5-SNAPSHOT-tests.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/export-gbif-hbase…> to org.gbif.pipelines/export-gbif-hbase/2.5.5-SNAPSHOT/export-gbif-hbase-2.5.5-SNAPSHOT.pom [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/export-gbif-hbase…> to org.gbif.pipelines/export-gbif-hbase/2.5.5-SNAPSHOT/export-gbif-hbase-2.5.5-SNAPSHOT.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/export-gbif-hbase…> to org.gbif.pipelines/export-gbif-hbase/2.5.5-SNAPSHOT/export-gbif-hbase-2.5.5-SNAPSHOT-shaded.jar [JENKINS] Archiving <https://builds.gbif.org/job/pipelines-la-dev/ws/pipelines/export-gbif-hbase…> to org.gbif.pipelines/export-gbif-hbase/2.5.5-SNAPSHOT/export-gbif-hbase-2.5.5-SNAPSHOT-tests.jar channel stopped WARN: Unable to locate 'report-task.txt' in the workspace. Did the SonarScanner succedeed? [Set GitHub commit status (universal)] ERROR on repos [GHRepository@13c81b9a[nodeId=MDEwOlJlcG9zaXRvcnkxMDQ4ODkxNjU=,description=Pipelines for data processing (GBIF and LivingAtlases),homepage=,name=pipelines,fork=false,archived=false,size=20981,milestones={},language=Java,commits={},source=<null>,parent=<null>,url=https://api.github.com/repos/gbif/pipelines,id=104889165,nodeId=<null>,createdAt=2017-09-26T13:36:09Z,updatedAt=2020-08-06T10:23:28Z]] (sha:4a5eaa0) with context:pipelines-la-dev Setting commit status on GitHub for https://github.com/gbif/pipelines/commit/4a5eaa02f0781e9a796d7609d0e2e456c2… Started calculate disk usage of build Finished Calculation of disk usage of build in 0 seconds Started calculate disk usage of workspace Finished Calculation of disk usage of workspace in 0 seconds

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