[IPT] basisOfRecord values

John Wieczorek tuco at berkeley.edu
Fri Jun 26 15:24:19 CEST 2015


I would say to feel free to add to the comments in the GitHub issue, but
don't neglect taking the conversation openly to tdwg-content. That's where
these things get discussed in the community, not GitHub issues.

On Fri, Jun 26, 2015 at 2:58 PM, Mergen Patricia <
patricia.mergen at africamuseum.be> wrote:

>  Hi all
>
>
>
> I have created an issues # 99 here : https://github.com/tdwg/dwc/issues/99
>
> from the mails exchanges, it seems that this affects several  providers
> and has wider implications then the point raised by Dimitri. I have not
> assigned the issue to anyone yet.
>
> Feel free to add your story and concerns here and to discuss the possible
> solutions.
>
>
>
> All the best
>
>
>
> Pat
>
>
>
> *From:* IPT [mailto:ipt-bounces at lists.gbif.org] *On Behalf Of *Hannu
> Saarenmaa
> *Sent:* vendredi 26 juin 2015 13:03
> *To:* ipt at lists.gbif.org
> *Subject:* Re: [IPT] basisOfRecord values
>
>
>
> Yes, indeed such discussion belongs to the TDWG list.   To open the thread
> we'd need some background of earlier discussions on basisOfRecord. It is
> one of the oldest terms and wasn't it even mandatory at some point.   If I
> remember right, related questions of the purpose of this term have been
> discussed earlier.
>
>
> Hannu
>
> On 2015-06-26 11:37, John Wieczorek wrote:
>
>  It might make sense to split the term, but I think that discussion has
> to take place in the context of the Darwin Core rather than on the IPT
> mailing list, no?
>
>
>
> On Fri, Jun 26, 2015 at 9:48 AM, Hannu Saarenmaa <
> hannu.saarenmaa at helsinki.fi> wrote:
>
> Dimitri brings up an important issue.   I think this whole list of
> allowable values of basisOfRecord needs to be thought over. The available
> controlled values do not meet the needs of earth observation, where we work
> with quantitative data.
>
> My working list of values looks like below.  Each of them also requires an
> individualCount, if possible:
>
> 1. Sighting (of live individuals from a distance, without intervention
> from an observer)
>
> 2. Observation (of captured, verified individuals, but no particular
> sampling scheme)
>
> 3. Monitoring (part of a scheme, where all individuals have been counted,
> resulting in a quantitative estimate of abundance, and lack of related
> record means abscence)
>
> Ideally, the protocol is also described in more detail for the entire
> dataset, in an EML document.  That applies in particular for Monitoring
> data, where we may be reasoning about abscence.
>
> I do not list specimens above.  Specimens may be preserved as evidence of
> observation and monitoring. (It is understood that a specimen record
> implies an occurrence.)  Literature records and photographs are similar, as
> they may link to any of the above categories.
>
> Would it make sense to split basisOfRecord into two terms, which are
> "occurrenceType" and "evidenceType"?
>
> - Hannu
>
> On 2015-06-25 17:21, Dimitri Brosens wrote:
>
> Dear,
>
>
>
> I was wondering, in DwC it is stated:
>
>
>
> *Recommended best practice is to use a controlled vocabulary such as the
> list of Darwin Core classes. Examples: "PreservedSpecimen",
> "FossilSpecimen", "LivingSpecimen", "HumanObservation",
> "MachineObservation". For discussion see **http://terms.tdwg.org/wiki/dwc:basisOfRecord
> <http://terms.tdwg.org/wiki/dwc:basisOfRecord>*
>
>
>
> As far as I understand, this is not mandatory and we have been using terms
> which are not in the 'supposed' controlled vocabulary on the tdwg site....
>
>
>
>
>
> Publishing version #22.1 of resource
> belgian-coccinellidae-inbo-occurrences failed: Archive generation for
> resource belgian-coccinellidae-inbo-occurrences failed: Can't validate
> DwC-A for resource belgian-coccinellidae-inbo-occurrences. Each row in the
> occurrence file(s) must have a basisOfRecord, and each basisOfRecord must
> match the Darwin Core Type Vocabulary (please note comparisons are case
> insensitive)
>
> Continue to resource overview.
>
>
>
> My problem is that IPT refuses to republish my previously published
> datasets where we use terms like: 'literatureObservation' , 'literature',
> fieldObservation or 'unknown
>
>
>
> What to do?
>
>
>
> Chrs,
>
> Dimi
>
>
>
> --
>
> Belgian Biodiversity Platform
>
> Dimitri Brosens
>
> Biodiversity Research Liaison Officer
>
> Research Institute for Nature and Forest
> Kliniekstraat 25
> 1070 Brussels
>
> ORCID: 0000-0002-0846-9116
>
> www.inbo.be
> www.biodiversity.be
> www.beescommunity.be
>
> *WATCH OUR BELGIAN BIODIVERSITY PLATFORM MOVIES ON:*
>
> http://vimeo.com/114955090 (data publication activities)
>
> http://vimeo.com/114955160 (science-policy activities)
>
> http://vimeo.com/114955193 (our general mission)
>
>
>
>
>
>
>
> _______________________________________________
>
> IPT mailing list
>
> IPT at lists.gbif.org
>
> http://lists.gbif.org/mailman/listinfo/ipt
>
>
>
>  --
>
>
>
> Hannu Saarenmaa, Research Director
>
> hannu.saarenmaa at uef.fi
>
> Mobile +358-50-4479668
>
>
>
> University of Eastern Finland
>
> Digitarium, SIB Labs, Joensuu Science Park
>
> Länsikatu 15 (P.O. Box 111)
>
> FI-80101 Joensuu
>
>
>
> www.digitarium.fi/en - Service Centre for High-Performance Digitisation
>
> www.eubon.eu - EU BON - GEO BON - Data Integration and Interoperability
>
>
> _______________________________________________
> IPT mailing list
> IPT at lists.gbif.org
> http://lists.gbif.org/mailman/listinfo/ipt
>
>
>
>
>
>  --
>
>
>
> Hannu Saarenmaa, Research Director
>
> hannu.saarenmaa at uef.fi
>
> Mobile +358-50-4479668
>
>
>
> University of Eastern Finland
>
> Digitarium, SIB Labs, Joensuu Science Park
>
> Länsikatu 15 (P.O. Box 111)
>
> FI-80101 Joensuu
>
>
>
> www.digitarium.fi/en - Service Centre for High-Performance Digitisation
>
> www.eubon.eu - EU BON - GEO BON - Data Integration and Interoperability
>
>
> _______________________________________________
> IPT mailing list
> IPT at lists.gbif.org
> http://lists.gbif.org/mailman/listinfo/ipt
>
>
-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.gbif.org/pipermail/ipt/attachments/20150626/7e42a126/attachment.html>


More information about the IPT mailing list