[IPT] [ZooKeys] GBIF IPT

Tim Robertson trobertson at gbif.org
Fri Jan 29 10:51:01 CET 2010 

Dear Ivailo

Sorry for the delay in replying but I have been away.

I get a timeout when I try and reach http://85.130.9.84:8080/ipt/index.html 
  - is it running?

I believe what you are seeing relates to a critical bug that is now  
fixed, but I would like to try and find a workaround for your issue.
Please can you send all future questions to the ipt at lists.gbif.org to  
make sure that you get the best and quickest response?

Best wishes,
Tim


On Jan 6, 2010, at 9:32 AM, Ivailo Stoyanov wrote:

> Dear Tim,
>
> I need to upload another dataset into the ZooKeys IPT (http://85.130.9.84:8080/ipt/index.html 
> ), but after entering the basic metadata for a new "Occurence  
> Resource" I get the following errors and can not proceed:
>
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> ======================================================================
>
> Yikes!
>
> javax.servlet.ServletException: could not insert:  
> [org.gbif.provider.model.OccurrenceResource]
> 	at  
> net.sf.ehcache.constructs.web.filter.Filter.logThrowable(Filter.java: 
> 152)
> 	at net.sf.ehcache.constructs.web.filter.Filter.doFilter(Filter.java: 
> 97)
> 	at  
> org 
> .apache 
> .catalina 
> .core 
> .ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java: 
> 215)
> 	at  
> org 
> .apache 
> .catalina 
> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> 	at  
> org 
> .appfuse 
> .webapp.filter.LocaleFilter.doFilterInternal(LocaleFilter.java:74)
> 	at  
> org 
> .springframework 
> .web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java: 
> 76)
> 	at  
> org 
> .apache 
> .catalina 
> .core 
> .ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java: 
> 215)
> 	at  
> org 
> .apache 
> .catalina 
> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> 	at  
> org 
> .springframework 
> .orm 
> .hibernate3 
> .support 
> .OpenSessionInViewFilter 
> .doFilterInternal(OpenSessionInViewFilter.java:198)
> 	at  
> org 
> .springframework 
> .web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java: 
> 76)
> 	at  
> org 
> .apache 
> .catalina 
> .core 
> .ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java: 
> 215)
> 	at  
> org 
> .apache 
> .catalina 
> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:359)
> 	at org.springframework.security.intercept.web.FilterSecurityInterceptor.invoke 
> (FilterSecurityInterceptor.java:109)
> 	at org.springframework.security.intercept.web.FilterSecurityInterceptor.doFilter 
> (FilterSecurityInterceptor.java:83)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .ui 
> .ExceptionTranslationFilter 
> .doFilterHttp(ExceptionTranslationFilter.java:101)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .providers 
> .anonymous 
> .AnonymousProcessingFilter 
> .doFilterHttp(AnonymousProcessingFilter.java:105)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .ui 
> .rememberme 
> .RememberMeProcessingFilter 
> .doFilterHttp(RememberMeProcessingFilter.java:116)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .wrapper 
> .SecurityContextHolderAwareRequestFilter 
> .doFilterHttp(SecurityContextHolderAwareRequestFilter.java:91)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .ui 
> .basicauth 
> .BasicProcessingFilter.doFilterHttp(BasicProcessingFilter.java:172)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .ui 
> .AbstractProcessingFilter.doFilterHttp(AbstractProcessingFilter.java: 
> 268)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security.ui.logout.LogoutFilter.doFilterHttp(LogoutFilter.java:87)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .ui 
> .SessionFixationProtectionFilter 
> .doFilterHttp(SessionFixationProtectionFilter.java:61)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security 
> .context 
> .HttpSessionContextIntegrationFilter 
> .doFilterHttp(HttpSessionContextIntegrationFilter.java:235)
> 	at  
> org 
> .springframework 
> .security.ui.SpringSecurityFilter.doFilter(SpringSecurityFilter.java: 
> 53)
> 	at org.springframework.security.util.FilterChainProxy 
> $VirtualFilterChain.doFilter(FilterChainProxy.java:371)
> 	at  
> org 
> .springframework 
> .security.util.FilterChainProxy.doFilter(FilterChainProxy.java:174)
> 	at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate 
> (DelegatingFilterProxy.java:236)
> 	at  
> org 
> .springframework 
> .web 
> .filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:167)
> 	at  
> org 
> .apache 
> .catalina 
> .core 
> .ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java: 
> 215)
> 	at  
> org 
> .apache 
> .catalina 
> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> 	at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal 
> (CharacterEncodingFilter.java:96)
> 	at  
> org 
> .springframework 
> .web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java: 
> 76)
> 	at  
> org 
> .apache 
> .catalina 
> .core 
> .ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java: 
> 215)
> 	at  
> org 
> .apache 
> .catalina 
> .core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:188)
> 	at  
> org 
> .apache 
> .catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java: 
> 213)
> 	at  
> org 
> .apache 
> .catalina.core.StandardContextValve.invoke(StandardContextValve.java: 
> 172)
> 	at  
> org 
> .apache 
> .catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
> 	at  
> org 
> .apache 
> .catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:117)
> 	at  
> org 
> .apache 
> .catalina.core.StandardEngineValve.invoke(StandardEngineValve.java: 
> 108)
> 	at  
> org 
> .apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java: 
> 174)
> 	at  
> org 
> .apache.coyote.http11.Http11Processor.process(Http11Processor.java: 
> 875)
> 	at org.apache.coyote.http11.Http11BaseProtocol 
> $Http11ConnectionHandler.processConnection(Http11BaseProtocol.java: 
> 665)
> 	at  
> org 
> .apache 
> .tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.java: 
> 528)
> 	at  
> org 
> .apache 
> .tomcat 
> .util 
> .net 
> .LeaderFollowerWorkerThread.runIt(LeaderFollowerWorkerThread.java:81)
> 	at org.apache.tomcat.util.threads.ThreadPool 
> $ControlRunnable.run(ThreadPool.java:689)
> 	at java.lang.Thread.run(Unknown Source)
>
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> = 
> ======================================================================
>
> What can I do now in order to reach the upload interface?
>
> Best wishes for the New Year,
> Ivailo
> -- 
> I. Stoyanov
> Editorial Secretary
>
> ZOOKEYS -- http://pensoftonline.net/zookeys
> BIORISK -- http://pensoftonline.net/biorisk
>

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