[Ala-portal] issues with the Collectory module.

sama sama at gbif.es
Thu Apr 24 12:30:24 CEST 2014 

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Ok, thanks again Dave.

- ------------------------------------------------------------
Santiago Martínez de la Riva Vivanco
GBIF.ES, Unidad de Coordinación
Real Jardín Botánico CSIC
Plaza de Murillo, 2
28014 Madrid, Spain
Tel: +34 91 4293917 x 273 - sama at gbif.es - www.gbif.es -
https://twitter.com/smr_sama


El 24/04/2014 12:29, David.Martin at csiro.au escribió:
> I should have added, you'll need to remove the existing collectory.war and the expanded war from /var/lib/tomcat7/webapps and copy this war file into  /var/lib/tomcat7/webapps renaming it to collectory.war.
> 
> Dave
> ________________________________________
> From: sama [sama at gbif.es]
> Sent: 24 April 2014 20:26
> To: Martin, Dave (CES, Black Mountain); ala-portal at lists.gbif.org
> Subject: Re: [Ala-portal] issues with the Collectory module.
> 
> Thanks so much for your quick reply.
> 
> I´m going to test it.
> 
> Kind regards.
> Santi.
> 
> ------------------------------------------------------------
> Santiago Martínez de la Riva Vivanco
> GBIF.ES, Unidad de Coordinación
> Real Jardín Botánico CSIC
> Plaza de Murillo, 2
> 28014 Madrid, Spain
> Tel: +34 91 4293917 x 273 - sama at gbif.es - www.gbif.es -
> https://twitter.com/smr_sama
> 
> 
> El 24/04/2014 12:24, David.Martin at csiro.au escribió:
>> Thanks for posting Santiago.
> 
>> There is a new build of the collectory that should fix the problems you mentioned with the manual GBIF file upload and editing the data resource:
> 
>> http://maven.ala.org.au/repository/au/org/ala/collectory/1.0/collectory-1.0.war
> 
>> This is now deployed on the demo server (http://ala-demo.gbif.org).
> 
>> Hope this helps.
> 
>> Dave Martin
>> ALA
> 
>> ________________________________________
>> From: ala-portal-bounces at lists.gbif.org [ala-portal-bounces at lists.gbif.org] on behalf of sama [sama at gbif.es]
>> Sent: 24 April 2014 17:03
>> To: ala-portal at lists.gbif.org
>> Subject: Re: [Ala-portal] issues with the Collectory module.
> 
>> My name is Santiago Martínez de la Riva. I'm member of node of Gbif
>> Spain. We have installed the data portal of ALA and we have a problem
>> with the collectory module.
> 
>> We can't create new collections or institutions. When we try to add
>> collections or institutions, the Portal shows the next message:
> 
>> http://193.146.75.144:8080/collectory/dataResource/uploadGBIFFile
> 
> 
>> Could be an error caused by problems with permissions in the directory
>> /data/collectory/upload? Because It seems that the server doesn't create
>> the temporal file.
> 
>> --------------------------------------
>> An unexpected error has occurred.
> 
>> If this is the first time this page has appeared, try the refresh button
>> in your browser.
> 
>> If this fails, try to return to the home page and start again.
> 
>> If this page is still displayed, please report the incident to ALA
>> support. Click here to email ALA support.
> 
>> The following is useful information that helps us discover what has
>> happened. Please copy it into emails requesting support.
> 
>> You might also like to expand the more detailed information by clicking
>> on 'Show stack trace' and copying that text to us as well.
> 
>> Thanks for your patience.
>> Error 500: Executing action [uploadGBIFFile] of controller
>> [au.org.ala.collectory.DataResourceController] caused exception: Runtime
>> error executing action
>> Servlet: grails
>> URI: /collectory/grails/dataResource/uploadGBIFFile.dispatch
>> Exception Message: /data/collectory/upload/tmp/1398257201760 (No such
>> file or directory)
>> Caused by: /data/collectory/upload/tmp/1398257201760 (No such file or
>> directory)
>> Class: ProviderGroupController
>> At Line: [522]
>> Code Snippet:
>> Show stack trace
>> Stack Trace
> 
>> java.io.FileNotFoundException: /data/collectory/upload/tmp/1398257201760
>> (No such file or directory)
> 
>>         at java.io.FileOutputStream.<init>(FileOutputStream.java:221)
> 
>>         at java.io.FileOutputStream.<init>(FileOutputStream.java:171)
> 
>>         at
>> org.apache.commons.fileupload.disk.DiskFileItem.write(DiskFileItem.java:449)
> 
>>         at
>> au.org.ala.collectory.GbifService.createGBIFResourceFromMultipart(GbifService.groovy:211)
> 
>>         at
>> au.org.ala.collectory.ProviderGroupController$_closure22.doCall(ProviderGroupController.groovy:522)
> 
>>         at
>> grails.plugin.cache.web.filter.PageFragmentCachingFilter.doFilter(PageFragmentCachingFilter.java:195)
> 
>> -----------------------------
> 
> 
>> We have realized too that in the demo portal of ala shows another error
>> which is related to updated process of one resource. When we try to
>> modify the information of one resource.
>> For example, for this resource:
> 
>> http://ala-ono.it.csiro.au/collectory/dataResource/show/dr172
> 
>> If we try to modify some field: the name, the url.., and we try to
>> update the resource, the portal shows the next error message:
> 
> 
>> -------------------
> 
>> An unexpected error has occurred.
> 
>> If this is the first time this page has appeared, try the refresh button
>> in your browser.
> 
>> If this fails, try to return to the home page and start again.
> 
>> If this page is still displayed, please report the incident to ALA
>> support. Click here to email ALA support.
> 
>> The following is useful information that helps us discover what has
>> happened. Please copy it into emails requesting support.
> 
>> You might also like to expand the more detailed information by clicking
>> on 'Show stack trace' and copying that text to us as well.
> 
>> Thanks for your patience.
>> Error 500: Executing action [updateBase] of controller
>> [au.org.ala.collectory.DataResourceController] caused exception: Runtime
>> error executing action
>> Servlet: grails
>> URI: /collectory/grails/dataResource/updateBase.dispatch
>> Exception Message: No signature of method: static
>> au.org.ala.collectory.BaseCommand.get() is applicable for argument
>> types: (java.lang.String) values: [173] Possible solutions:
>> getAt(java.lang.String), getId(), grep(), grep(java.lang.Object),
>> wait(), any()
>> Caused by: No signature of method: static
>> au.org.ala.collectory.BaseCommand.get() is applicable for argument
>> types: (java.lang.String) values: [173] Possible solutions:
>> getAt(java.lang.String), getId(), grep(), grep(java.lang.Object),
>> wait(), any()
>> Class: Unknown
>> At Line: [-1]
>> Code Snippet:
>> Show stack trace
>> Stack Trace
> 
>> groovy.lang.MissingMethodException: No signature of method: static
>> au.org.ala.collectory.BaseCommand.get() is applicable for argument
>> types: (java.lang.String) values: [173]
>> Possible solutions: getAt(java.lang.String), getId(), grep(),
>> grep(java.lang.Object), wait(), any()
> 
>>         at
>> grails.plugin.cache.web.filter.PageFragmentCachingFilter.doFilter(PageFragmentCachingFilter.java:195)
> 
>>         at
>> grails.plugin.cache.web.filter.AbstractFilter.doFilter(AbstractFilter.java:63)
> 
>>         at au.org.ala.cas.client.UriFilter.doFilter(UriFilter.java:200)
> 
>>         at au.org.ala.cas.client.UriFilter.doFilter(UriFilter.java:200)
> 
>>         at au.org.ala.cas.client.UriFilter.doFilter(UriFilter.java:200)
> 
>> -------
> 
> 
>> Kind regards.
>> Santi.
>> ------------------------------------------------------------
>> Santiago Martínez de la Riva Vivanco
>> GBIF.ES, Unidad de Coordinación
>> Real Jardín Botánico CSIC
>> Plaza de Murillo, 2
>> 28014 Madrid, Spain
>> Tel: +34 91 4293917 x 273 - sama at gbif.es - www.gbif.es -
>> https://twitter.com/smr_sama
> 
> 
>> _______________________________________________
>> Ala-portal mailing list
>> Ala-portal at lists.gbif.org
>> http://lists.gbif.org/mailman/listinfo/ala-portal
>> .
> 
> .
> 
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