[Ala-portal] issues with the Collectory module.

Thu Apr 24 12:29:08 CEST 2014

I should have added, you'll need to remove the existing collectory.war and the expanded war from /var/lib/tomcat7/webapps and copy this war file into  /var/lib/tomcat7/webapps renaming it to collectory.war.

Dave
________________________________________
From: sama [sama at gbif.es]
Sent: 24 April 2014 20:26
To: Martin, Dave (CES, Black Mountain); ala-portal at lists.gbif.org
Subject: Re: [Ala-portal] issues with the Collectory module.

-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Thanks so much for your quick reply.

I´m going to test it.

Kind regards.
Santi.

- ------------------------------------------------------------
Santiago Martínez de la Riva Vivanco
GBIF.ES, Unidad de Coordinación
Real Jardín Botánico CSIC
Plaza de Murillo, 2
28014 Madrid, Spain
Tel: +34 91 4293917 x 273 - sama at gbif.es - www.gbif.es -
https://twitter.com/smr_sama

El 24/04/2014 12:24, David.Martin at csiro.au escribió:
> Thanks for posting Santiago.
>
> There is a new build of the collectory that should fix the problems you mentioned with the manual GBIF file upload and editing the data resource:
>
> http://maven.ala.org.au/repository/au/org/ala/collectory/1.0/collectory-1.0.war
>
> This is now deployed on the demo server (http://ala-demo.gbif.org).
>
> Hope this helps.
>
> Dave Martin
> ALA
>
> ________________________________________
> From: ala-portal-bounces at lists.gbif.org [ala-portal-bounces at lists.gbif.org] on behalf of sama [sama at gbif.es]
> Sent: 24 April 2014 17:03
> To: ala-portal at lists.gbif.org
> Subject: Re: [Ala-portal] issues with the Collectory module.
>
> My name is Santiago Martínez de la Riva. I'm member of node of Gbif
> Spain. We have installed the data portal of ALA and we have a problem
> with the collectory module.
>
> We can't create new collections or institutions. When we try to add
> collections or institutions, the Portal shows the next message:
>
> http://193.146.75.144:8080/collectory/dataResource/uploadGBIFFile
>
>
> Could be an error caused by problems with permissions in the directory
> /data/collectory/upload? Because It seems that the server doesn't create
> the temporal file.
>
> --------------------------------------
> An unexpected error has occurred.
>
> If this is the first time this page has appeared, try the refresh button
> in your browser.
>
> If this fails, try to return to the home page and start again.
>
> If this page is still displayed, please report the incident to ALA
> support. Click here to email ALA support.
>
> The following is useful information that helps us discover what has
> happened. Please copy it into emails requesting support.
>
> You might also like to expand the more detailed information by clicking
> on 'Show stack trace' and copying that text to us as well.
>
> Thanks for your patience.
> Error 500: Executing action [uploadGBIFFile] of controller
> [au.org.ala.collectory.DataResourceController] caused exception: Runtime
> error executing action
> Servlet: grails
> URI: /collectory/grails/dataResource/uploadGBIFFile.dispatch
> Exception Message: /data/collectory/upload/tmp/1398257201760 (No such
> file or directory)
> Caused by: /data/collectory/upload/tmp/1398257201760 (No such file or
> directory)
> Class: ProviderGroupController
> At Line: [522]
> Code Snippet:
> Show stack trace
> Stack Trace
>
> java.io.FileNotFoundException: /data/collectory/upload/tmp/1398257201760
> (No such file or directory)
>
>         at java.io.FileOutputStream.<init>(FileOutputStream.java:221)
>
>         at java.io.FileOutputStream.<init>(FileOutputStream.java:171)
>
>         at
> org.apache.commons.fileupload.disk.DiskFileItem.write(DiskFileItem.java:449)
>
>         at
> au.org.ala.collectory.GbifService.createGBIFResourceFromMultipart(GbifService.groovy:211)
>
>         at
> au.org.ala.collectory.ProviderGroupController$_closure22.doCall(ProviderGroupController.groovy:522)
>
>         at
> grails.plugin.cache.web.filter.PageFragmentCachingFilter.doFilter(PageFragmentCachingFilter.java:195)
>
> -----------------------------
>
>
> We have realized too that in the demo portal of ala shows another error
> which is related to updated process of one resource. When we try to
> modify the information of one resource.
> For example, for this resource:
>
> http://ala-ono.it.csiro.au/collectory/dataResource/show/dr172
>
> If we try to modify some field: the name, the url.., and we try to
> update the resource, the portal shows the next error message:
>
>
> -------------------
>
> An unexpected error has occurred.
>
> If this is the first time this page has appeared, try the refresh button
> in your browser.
>
> If this fails, try to return to the home page and start again.
>
> If this page is still displayed, please report the incident to ALA
> support. Click here to email ALA support.
>
> The following is useful information that helps us discover what has
> happened. Please copy it into emails requesting support.
>
> You might also like to expand the more detailed information by clicking
> on 'Show stack trace' and copying that text to us as well.
>
> Thanks for your patience.
> Error 500: Executing action [updateBase] of controller
> [au.org.ala.collectory.DataResourceController] caused exception: Runtime
> error executing action
> Servlet: grails
> URI: /collectory/grails/dataResource/updateBase.dispatch
> Exception Message: No signature of method: static
> au.org.ala.collectory.BaseCommand.get() is applicable for argument
> types: (java.lang.String) values: [173] Possible solutions:
> getAt(java.lang.String), getId(), grep(), grep(java.lang.Object),
> wait(), any()
> Caused by: No signature of method: static
> au.org.ala.collectory.BaseCommand.get() is applicable for argument
> types: (java.lang.String) values: [173] Possible solutions:
> getAt(java.lang.String), getId(), grep(), grep(java.lang.Object),
> wait(), any()
> Class: Unknown
> At Line: [-1]
> Code Snippet:
> Show stack trace
> Stack Trace
>
> groovy.lang.MissingMethodException: No signature of method: static
> au.org.ala.collectory.BaseCommand.get() is applicable for argument
> types: (java.lang.String) values: [173]
> Possible solutions: getAt(java.lang.String), getId(), grep(),
> grep(java.lang.Object), wait(), any()
>
>         at
> grails.plugin.cache.web.filter.PageFragmentCachingFilter.doFilter(PageFragmentCachingFilter.java:195)
>
>         at
> grails.plugin.cache.web.filter.AbstractFilter.doFilter(AbstractFilter.java:63)
>
>         at au.org.ala.cas.client.UriFilter.doFilter(UriFilter.java:200)
>
>         at au.org.ala.cas.client.UriFilter.doFilter(UriFilter.java:200)
>
>         at au.org.ala.cas.client.UriFilter.doFilter(UriFilter.java:200)
>
> -------
>
>
> Kind regards.
> Santi.
> ------------------------------------------------------------
> Santiago Martínez de la Riva Vivanco
> GBIF.ES, Unidad de Coordinación
> Real Jardín Botánico CSIC
> Plaza de Murillo, 2
> 28014 Madrid, Spain
> Tel: +34 91 4293917 x 273 - sama at gbif.es - www.gbif.es -
> https://twitter.com/smr_sama
>
>
> _______________________________________________
> Ala-portal mailing list
> Ala-portal at lists.gbif.org
> http://lists.gbif.org/mailman/listinfo/ala-portal
> .
>
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v2.0.22 (MingW32)
Comment: Using GnuPG with Thunderbird - http://www.enigmail.net/

iQEcBAEBAgAGBQJTWObgAAoJEMV2/tf+QnQD5fEH/30YVacnbkZnWmV3CXig5oeP
6XYCRsp7jHfeHX8V6AmcVy4TlC6tVamTcSxmPophriv2LP4eyQCv/MOxDCHf02V8
CMCBtYyMj4z0O6D5r+Las7Ygz1OunVMBwwrA0GgfcAsLTe6fn5XFxjzeA1KNVSIt
Yg+vQwM438iNuhDsA5mi4//Wotl13+5u7u8yI98wJjNsczorP/RkUwoOo+ksWN1m
B4rGl6D4+vkP7+3UY2DaBLwY3wt+gqLpyBWUCDRvQOJLHCKw5WjdTS7t8vQNmPng
vB5xkDR/quWCnpleGiSLrbCHq3zD3wsjnjY0Z5jLLe4aajK+RiYQVKeGYENjEUA=
=Yp5w
-----END PGP SIGNATURE-----