[IPT] error publishing resource,
Kyle Braak [GBIF]
kbraak at gbif.org
Thu Jan 10 12:39:06 CET 2013
Dear Dimitri,
It appears as if you have encountered this issue which has been fixed for version 2.0.4. I recommend you follow the suggested fix in the issue, or better, upgrade to the 2.0.4 release.
Best regards,
Kyle
On Jan 10, 2013, at 12:27 PM, BROSENS, Dimitri wrote:
> Dear,
>
> IPT returns me an error while updating a resource. I think it s rather strange as it worked for all the updating of similar other query ‘s. I removed the connection to the db completely, retried and it gives me exactly the same error. I also totally removed the data and tried to update..; same error.
>
> Any ideas?
> Chrs,
> Dimi
>
> Ps: happy NY J
>
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/life_stage exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/gbif/life_stage.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/nomenclatural_code exists already - overwriting with new vocabulary fromhttp://rs.gbif.org/vocabulary/gbif/nomenclatural_code.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/establishment_means/ exists already - overwriting with new vocabulary fromhttp://rs.gbif.org/vocabulary/gbif/establishment_means.xml
> WARN Vocabulary URI http://iso.org/639-1 exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/iso/639-1.xml
> WARN Vocabulary URI http://dublincore.org/documents/dcmi-type-vocabulary/ exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/dcterms/type.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/agentRole exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/gbif/agent_role.xml
> WARN Vocabulary URI http://iso.org/639-2 exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/iso/639-2.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/resource_type exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/gbif/resource_type.xml
> WARN Vocabulary URI http://rs.tdwg.org/dwc/dwctype/ exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/dwc/basis_of_record.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/occurrence_status/ exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/gbif/occurrence_status.xml
> WARN Vocabulary URI http://rs.gbif.org/vocab/boolean/ exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/basic/boolean.xml
> WARN Vocabulary URI http://iso.org/iso3166-1/alpha2 exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/iso/3166-1_alpha2.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/preservation_method exists already - overwriting with new vocabulary fromhttp://rs.gbif.org/vocabulary/gbif/preservation_method.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/rank exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/gbif/rank.xml
> WARN Vocabulary URI http://rs.gbif.org/vocab/cites/ exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/un/cites_appendix.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/iucn/threat_status/ exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/iucn/threat_status.xml
> WARN Vocabulary URI http://rs.gbif.org/vocabulary/gbif/sex exists already - overwriting with new vocabulary from http://rs.gbif.org/vocabulary/gbif/sex.xml
> ERROR Error publishing resource
> java.lang.NullPointerException
> at org.gbif.ipt.task.Eml2Rtf.addMethods(Eml2Rtf.java:547)
> at org.gbif.ipt.task.Eml2Rtf.writeEmlIntoRtf(Eml2Rtf.java:927)
> at org.gbif.ipt.service.manage.impl.ResourceManagerImpl.publishRtf(ResourceManagerImpl.java:810)
> at org.gbif.ipt.service.manage.impl.ResourceManagerImpl.publishMetadata(ResourceManagerImpl.java:788)
> at org.gbif.ipt.service.manage.impl.ResourceManagerImpl.publish(ResourceManagerImpl.java:741)
> at org.gbif.ipt.action.manage.OverviewAction.publish(OverviewAction.java:354)
> at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
> at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
> at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
> at java.lang.reflect.Method.invoke(Method.java:616)
> at com.opensymphony.xwork2.DefaultActionInvocation.invokeAction(DefaultActionInvocation.java:452)
> at com.opensymphony.xwork2.DefaultActionInvocation.invokeActionOnly(DefaultActionInvocation.java:291)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:254)
> at com.opensymphony.xwork2.interceptor.DefaultWorkflowInterceptor.doIntercept(DefaultWorkflowInterceptor.java:176)
> at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.validator.ValidationInterceptor.doIntercept(ValidationInterceptor.java:263)
> at org.apache.struts2.interceptor.validation.AnnotationValidationInterceptor.doIntercept(AnnotationValidationInterceptor.java:68)
> at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.interceptor.ConversionErrorInterceptor.intercept(ConversionErrorInterceptor.java:133)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.interceptor.ParametersInterceptor.doIntercept(ParametersInterceptor.java:207)
> at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.interceptor.ParametersInterceptor.doIntercept(ParametersInterceptor.java:207)
> at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.apache.struts2.interceptor.MultiselectInterceptor.intercept(MultiselectInterceptor.java:75)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.apache.struts2.interceptor.CheckboxInterceptor.intercept(CheckboxInterceptor.java:94)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.interceptor.PrepareInterceptor.doIntercept(PrepareInterceptor.java:166)
> at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.apache.struts2.interceptor.ServletConfigInterceptor.intercept(ServletConfigInterceptor.java:164)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.interceptor.ExceptionMappingInterceptor.intercept(ExceptionMappingInterceptor.java:187)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at com.opensymphony.xwork2.interceptor.I18nInterceptor.intercept(I18nInterceptor.java:176)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.gbif.ipt.struts2.RedirectMessageInterceptor.doIntercept(RedirectMessageInterceptor.java:128)
> at com.opensymphony.xwork2.interceptor.MethodFilterInterceptor.intercept(MethodFilterInterceptor.java:98)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.gbif.ipt.struts2.RequireManagerInterceptor.intercept(RequireManagerInterceptor.java:80)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.gbif.ipt.struts2.SetupAndCancelInterceptor.intercept(SetupAndCancelInterceptor.java:60)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.gbif.ipt.struts2.ResourceSessionInterceptor.intercept(ResourceSessionInterceptor.java:42)
> at com.google.inject.struts2.Struts2Factory$ProvidedInterceptor.intercept(Struts2Factory.java:215)
> at com.opensymphony.xwork2.DefaultActionInvocation.invoke(DefaultActionInvocation.java:248)
> at org.apache.struts2.impl.StrutsActionProxy.execute(StrutsActionProxy.java:52)
> at org.apache.struts2.dispatcher.Dispatcher.serviceAction(Dispatcher.java:485)
> at org.apache.struts2.dispatcher.ng.ExecuteOperations.executeAction(ExecuteOperations.java:77)
> at org.apache.struts2.dispatcher.ng.filter.StrutsPrepareAndExecuteFilter.doFilter(StrutsPrepareAndExecuteFilter.java:91)
> at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
> at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at com.google.inject.servlet.FilterChainInvocation.doFilter(FilterChainInvocation.java:66)
> at com.google.inject.servlet.ManagedFilterPipeline.dispatch(ManagedFilterPipeline.java:118)
> at com.google.inject.servlet.GuiceFilter.doFilter(GuiceFilter.java:113)
> at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:235)
> at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:206)
> at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:233)
> at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:191)
> at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:127)
> at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:102)
> at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:109)
> at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:298)
> at org.apache.coyote.http11.Http11Processor.process(Http11Processor.java:859)
> at org.apache.coyote.http11.Http11Protocol$Http11ConnectionHandler.process(Http11Protocol.java:588)
> at org.apache.tomcat.util.net.JIoEndpoint$Worker.run(JIoEndpoint.java:489)
> at java.lang.Thread.run(Thread.java:636)
> ERROR Error publishing resource
> java.lang.NullPointerException
>
>
>
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