[IPT] FW: What does Yikes mean

Tim Robertson (GBIF) trobertson at gbif.org
Thu Feb 18 18:39:04 CET 2010


Dear Hannu,

Could you also please create a new user and provide admin permissions,  
and let mdoering at gbif.org and trobertson at gbif.org know the  
credentials, along with the URL to your IPT?
After diagnostics, you can remove the permissions again.

Many thanks,
Tim



On Feb 18, 2010, at 6:23 PM, Markus Döring (GBIF) wrote:

> Dear Andrea & Hannu,
> the stack trace is not very informative I am afraid.
> In those cases its best to enable debug logging, restart tomcat and  
> hit the Yikes again.
> The IPT log file in your dataDir/logging should then hopefully have  
> more information which we are keen on checking.
>
> you can change the logging settings in the admin configuration:
> http://code.google.com/p/gbif-providertoolkit/wiki/UserManualChapter4#4.1.1__Settings
>
> might be wirth adding this hint to teh FAQ section...
>
> Markus
>
>
> On Feb 18, 2010, at 16:49, Andrea Hahn (GBIF) wrote:
>
>> Dear GBIF IPT contributors,
>>
>> Hannu is getting stuck with a "Yikes" issue (original email below).  
>> I am aware of the issue outlined in the IPT FAQ at http://code.google.com/p/gbif-providertoolkit/wiki/FAQ 
>> , and have pointed Hannu at it. Do you have any additional comment  
>> or advice that might help to fix this?
>>
>> Many thanks in advance,
>> Andrea
>>
>> ---------------------------------------------------------------
>> Andrea Hahn  (ahahn at gbif.org)
>> Data Portal Manager
>> Global Biodiversity Information Facility Secretariat  
>> Universitetsparken 15, DK-2100 Copenhagen, Denmark
>> Tel: +45-35321491 Fax: +45-35321480
>> URL: http://www.gbif.org
>> ---------------------------------------------------------------
>>
>>
>>
>>
>> -----Original Message-----
>> From: Hannu Saarenmaa [mailto:hannu.saarenmaa at helsinki.fi]
>> Sent: Thursday, February 18, 2010 4:40 PM
>> To: GBIF Helpdesk
>> Subject: What does Yikes mean
>>
>> Our IPT has become unusable.  Even simple things like upload of new  
>> file
>> and click on Mappings->Edit (dump below) give this kind of trail.  We
>> are not Java and Tomcat experts, so we need help.  Does this dump  
>> tell
>> you something?
>>
>> Hannu
>>
>> Yikes!
>>
>> javax.servlet.ServletException: Filter execution threw an exception
>>      at
>> net 
>> .sf.ehcache.constructs.web.filter.Filter.logThrowable(Filter.java: 
>> 152)
>>      at
>> net.sf.ehcache.constructs.web.filter.Filter.doFilter(Filter.java:97)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.internalDoFilter(Applicati
>> onFilterChain.java:215)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.doFilter(ApplicationFilter
>> Chain.java:188)
>>      at
>> org 
>> .appfuse 
>> .webapp.filter.LocaleFilter.doFilterInternal(LocaleFilter.java:
>> 74)
>>      at
>> org 
>> .springframework 
>> .web.filter.OncePerRequestFilter.doFilter(OncePerReques
>> tFilter.java:76)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.internalDoFilter(Applicati
>> onFilterChain.java:215)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.doFilter(ApplicationFilter
>> Chain.java:188)
>>      at
>> org 
>> .springframework 
>> .orm.hibernate3.support.OpenSessionInViewFilter.doFilte
>> rInternal(OpenSessionInViewFilter.java:198)
>>      at
>> org 
>> .springframework 
>> .web.filter.OncePerRequestFilter.doFilter(OncePerReques
>> tFilter.java:76)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.internalDoFilter(Applicati
>> onFilterChain.java:215)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.doFilter(ApplicationFilter
>> Chain.java:188)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:359)
>>      at
>> org.springframework.security.intercept.web.FilterSecurityInterceptor.invok
>> e(FilterSecurityInterceptor.java:109)
>>      at
>> org.springframework.security.intercept.web.FilterSecurityInterceptor.doFil
>> ter(FilterSecurityInterceptor.java:83)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.ui.ExceptionTranslationFilter.doFilterHttp(Ex
>> ceptionTranslationFilter.java:101)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.providers.anonymous.AnonymousProcessingFilter
>> .doFilterHttp(AnonymousProcessingFilter.java:105)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.ui.rememberme.RememberMeProcessingFilter.doFi
>> lterHttp(RememberMeProcessingFilter.java:116)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.wrapper.SecurityContextHolderAwareRequestFilt
>> er.doFilterHttp(SecurityContextHolderAwareRequestFilter.java:91)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.ui.basicauth.BasicProcessingFilter.doFilterHt
>> tp(BasicProcessingFilter.java:172)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.ui.AbstractProcessingFilter.doFilterHttp(Abst
>> ractProcessingFilter.java:268)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.ui.logout.LogoutFilter.doFilterHttp(LogoutFil
>> ter.java:87)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.ui.SessionFixationProtectionFilter.doFilterHt
>> tp(SessionFixationProtectionFilter.java:61)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.context.HttpSessionContextIntegrationFilter.d
>> oFilterHttp(HttpSessionContextIntegrationFilter.java:235)
>>      at
>> org 
>> .springframework 
>> .security.ui.SpringSecurityFilter.doFilter(SpringSecuri
>> tyFilter.java:53)
>>      at
>> org.springframework.security.util.FilterChainProxy 
>> $VirtualFilterChain.doFi
>> lter(FilterChainProxy.java:371)
>>      at
>> org 
>> .springframework 
>> .security.util.FilterChainProxy.doFilter(FilterChainPro
>> xy.java:174)
>>      at
>> org 
>> .springframework 
>> .web.filter.DelegatingFilterProxy.invokeDelegate(Delega
>> tingFilterProxy.java:236)
>>      at
>> org 
>> .springframework 
>> .web.filter.DelegatingFilterProxy.doFilter(DelegatingFi
>> lterProxy.java:167)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.internalDoFilter(Applicati
>> onFilterChain.java:215)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.doFilter(ApplicationFilter
>> Chain.java:188)
>>      at
>> org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal 
>> (Ch
>> aracterEncodingFilter.java:96)
>>      at
>> org 
>> .springframework 
>> .web.filter.OncePerRequestFilter.doFilter(OncePerReques
>> tFilter.java:76)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.internalDoFilter(Applicati
>> onFilterChain.java:215)
>>      at
>> org 
>> .apache 
>> .catalina.core.ApplicationFilterChain.doFilter(ApplicationFilter
>> Chain.java:188)
>>      at
>> org 
>> .apache 
>> .catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.
>> java:213)
>>      at
>> org 
>> .apache 
>> .catalina.core.StandardContextValve.invoke(StandardContextValve.
>> java:172)
>>      at
>> org 
>> .apache 
>> .catalina.core.StandardHostValve.invoke(StandardHostValve.java:1
>> 27)
>>      at
>> org 
>> .apache 
>> .catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:1
>> 17)
>>      at
>> org 
>> .apache 
>> .catalina.core.StandardEngineValve.invoke(StandardEngineValve.ja
>> va:108)
>>      at
>> org 
>> .apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java: 
>> 174
>> )
>>      at
>> org 
>> .apache.coyote.http11.Http11Processor.process(Http11Processor.java: 
>> 873)
>>      at
>> org.apache.coyote.http11.Http11BaseProtocol 
>> $Http11ConnectionHandler.proces
>> sConnection(Http11BaseProtocol.java:665)
>>      at
>> org 
>> .apache 
>> .tomcat.util.net.PoolTcpEndpoint.processSocket(PoolTcpEndpoint.j
>> ava:528)
>>      at
>> org 
>> .apache 
>> .tomcat.util.net.LeaderFollowerWorkerThread.runIt(LeaderFollower
>> WorkerThread.java:81)
>>      at
>> org.apache.tomcat.util.threads.ThreadPool 
>> $ControlRunnable.run(ThreadPool.j
>> ava:689)
>>      at java.lang.Thread.run(Thread.java:619)
>>
>> --
>> Hannu Saarenmaa
>> Head of Unit for Biodiversity Informatics
>> (yli-intendentti, lajitietotiimi)
>> Finnish Museum of Natural History
>> P.O. Box 17 (P.Rautatiekatu 13)
>> FIN-00014 University of Helsinki
>>
>> hannu.saarenmaa at helsinki.fi
>> Telephone +358-9-191-28688
>> Mobile +358-50-3102689
>> http://www.gbif.fi/
>>
>>
>>
>> _______________________________________________
>> IPT mailing list
>> IPT at lists.gbif.org
>> http://lists.gbif.org/mailman/listinfo/ipt
>
>



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