[Ala-portal] Populating portal for a country
Nicolas Noé
n.noe at biodiversity.be
Fri Jun 12 16:23:06 CEST 2015
Thanks to the three of you for your complementary answers, that's really
helpful.
Dave, I confirm that we are really interested in an improved version
that triggers download in a more gentle way to avoid triggering GBIF's
defense mechanism. And Marie-Elise, we are also very interested in your
scripts. Don't hesitate if we can be of any help to one of you!
Have a great weekend,
Nico
Le 11/06/15 09:42, Marie Elise Lecoq a écrit :
> Hi Nico,
>
> For the point 3, I wrote some scripts in order to add data using the
> GBIF API. It helps me a lot especially for contacts and institutions.
> I will clean up and test a little bit more then I can put it on my
> github if that can help.
>
> Cheers from Madagascar !
> Marie
>
> On Thu, Jun 11, 2015 at 10:33 AM, Tim Robertson <trobertson at gbif.org
> <mailto:trobertson at gbif.org>> wrote:
>
>> 1) My understanding is the GBIF API has been bombarded recently
>> and they have now put in place a limit of the number of
>> concurrent downloads to 3. The collectory currently attempts 10
>> download at a time - hence our problem.
>> We’ll try and push out an update to fix this very soon.
>
> I’d like to just explain why this was rushed out.
> This was a necessary step as GBIF.org <http://GBIF.org> was
> exposed to DOS attacks (often inadvertently) which was happening.
> In addition the GBIF R library now makes it trivial to download
> from GBIF and users can easily write a loop in code and trigger
> huge numbers of download which would block the system for others.
>
> We’ll continue to tune the values by monitoring operations, and
> probably introduce higher per-user limits so we can e.g. increase
> the concurrency for known ALA accounts.
>
> Please contact me if this causes any issue Nico.
>
>
>>> On 10 Jun 2015, at 1:59 pm, Nicolas Noé <n.noe at biodiversity.be
>>> <mailto:n.noe at biodiversity.be>> wrote:
>>>
>>> Hi all,
>>>
>>> I'm trying to set-up an experimental instance of ALA for
>>> Belgium. The idea is to present all data published by our
>>> belgian institutions, in order to give those institutations /
>>> collections / datasets more visibility.
>>>
>>> What's the recommended way to load this data (everything at GBIF
>>> published by Belgian institutions). I used the "Add all GBIF
>>> resource for a country" from the Collectory admin interface, but
>>>
>>> 1) I encountered some errors. All datasets detected correctly,
>>> but only 10 are loaded - for the rest I get the message "Failed.
>>> Please check your authentication credentials are valid". The
>>> authentication credentials are indeed correct, since I only
>>> entered once (so, also for the working dataset). When looking at
>>> my downloads on the GBIF website, I can see no track those
>>> "failed" datasets. Can I get debugging information ? Should I
>>> fill a bug report ? In the ala-collectory repository ? Or some
>>> other ?
>>>
>>> 2) Also, the /collectory/manage/gbifLoadCountry pages states
>>> that "This is a simple method of bootstrapping an installation
>>> with data provided by GBIF web services. This is not intended
>>> for long-term production use.". So maybe I should use another
>>> method to load all the data for my country.
>>>
>>> 3) How are the (dataset) metadata populated when using this
>>> method ? It seems the basic metadata is there, but not much
>>> more. Should we do it by hand ? Should we write a tool to do it
>>> ? How about updates?
>>>
>>> Thanks a lot!
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>>> http://lists.gbif.org/mailman/listinfo/ala-portal
>>
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