[Ala-portal] getting started issues

Miguel Carboni mcarboni at mincyt.gob.ar
Thu Jun 19 21:12:05 CEST 2014


Hi, Tim!

I've followed the newer configuration file. It's easier, yet there is a
little issue.

When configure the ansible playbook it throws some kind of exception
(attached the full stack)
 TASK: [nameindex | unpackage the lucene index if it was newly copied]
********* 
failed: [10.1.1.2] => {"changed": true, "cmd": "tar
xvf /data/lucene/col_namematching.tgz -C /data/lucene/ ", "delta":
"0:00:26.892503", "end": "2014-06-19 18:50:56.676597", "item": "", "rc":
2, "start": "2014-06-19 18:50:29.784094"}
stderr: tar: Ignoring unknown extended header keyword
`LIBARCHIVE.creationtime'

Any idea?

Best regards and thank you very much
Miguel

El mié, 18-06-2014 a las 21:50 +0200, Tim Robertson [GBIF] escribió:
> Hi Miguel
> 
> 
> One of the goals of the forthcoming workshop is to clean up legacy
> documentation such as that which you have stumbled upon.  You are
> following old guides there I am afraid.
> 
> 
> Please can you start here: http://dev.gbif.org/wiki/display/ALA/01
> +Essential+tools+and+environment+configurations
> 
> 
> The installation is actually run as an Ansible playbook now and not
> the shell script you were using.  Once Ansible is set up, and you have
> a target host, the installation should be very straightforward.
> 
> 
> Sorry about this - it looks like you made great progress though so I
> am sure you learnt something about the underlying pieces at least. 
> 
> 
> Thanks,
> Tim
> 
> On 18 Jun 2014, at 18:50, Miguel Carboni <mcarboni at mincyt.gob.ar>
> wrote:
> 
> > Hi!
> > 
> > I'm following the getting started page from:
> > https://code.google.com/p/ala-portal/wiki/GettingStarted
> > 
> > And had a couple of minor issues:
> > 
> > - When I try to download cassandra and solr, the cited releases
> > aren't
> > available in mirror sites. I've downloaded this ones:
> > http://apache.dattatec.com/cassandra/1.2.16/apache-cassandra-1.2.16-bin.tar.gz
> > http://apache.dattatec.com/lucene/solr/4.8.1/solr-4.8.1.tgz
> > 
> > I also had a little issue "unzip" the taxon.tgz. It looks like if it
> > weren't zipped, just tared.
> > 
> > $ tar xf taxon.tgz
> > 
> > Will do.
> > 
> > For the biocache service, the
> > http://ala-portal.googlecode.com/svn/trunk/biocache-service/biocache-config/applicationContext.xml.empty download link was broken. Is this a valid one?
> > http://ala-portal.googlecode.com/svn/trunk/biocache-service/config/applicationContext.xml.empty
> > 
> > Is this properties file correct?
> > http://ala-portal.googlecode.com/svn/trunk/biocache-service/config/biocache-config.properties
> > 
> > I've found many references to remote servers. I've already changed
> > the
> > solrHome. Should I change any other?
> > 
> > When I get to the biocache cli. If i press Enter or call any command
> > I
> > get 
> > 
> > $ java -cp .:biocache.jar -Xmx2g -Xms2g
> >  au.org.ala.util.CommandLineTool
> > ----------------------------
> > | Biocache management tool |
> > ----------------------------
> > 
> > Please supply a command or hit ENTER to view command list. 
> > biocache> healthcheck
> > BANG! Guice exceptions! The full exception is in the attached file.
> > 
> > Any clue? Is there any jar missing in the classpath or any
> > configuration
> > file missing?
> > 
> > Thank you very much in advance and best regards,
> > Miguel
> > 
> > <exception.txt>_______________________________________________
> > Ala-portal mailing list
> > Ala-portal at lists.gbif.org
> > http://lists.gbif.org/mailman/listinfo/ala-portal
> 
> ----------------------------------------------------------------------------------------
> 
> Tim Robertson - GBIF Head of Informatics - trobertson at gbif.org
> 
> Global Biodiversity Information Facility http://www.gbif.org/
> 
> GBIF Secretariat, Universitetsparken 15, DK-2100 Copenhagen Ø, Denmark
> 
> Tel: +45 3532 1487  Mob: +45 2826 1487  Fax: +45 2875 1480
> 
> ----------------------------------------------------------------------------------------
> 
> 
> 
> 

-------------- next part --------------
 TASK: [nameindex | unpackage the lucene index if it was newly copied] ********* 
failed: [10.1.1.2] => {"changed": true, "cmd": "tar xvf /data/lucene/col_namematching.tgz -C /data/lucene/ ", "delta": "0:00:26.892503", "end": "2014-06-19 18:50:56.676597", "item": "", "rc": 2, "start": "2014-06-19 18:50:29.784094"}
stderr: tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Ignoring unknown extended header keyword `LIBARCHIVE.creationtime'
tar: Ignoring unknown extended header keyword `SCHILY.dev'
tar: Ignoring unknown extended header keyword `SCHILY.ino'
tar: Ignoring unknown extended header keyword `SCHILY.nlink'
tar: Unexpected EOF in archive
tar: rmtlseek not stopped at a record boundary
tar: Error is not recoverable: exiting now
stdout: col_namematching/
col_namematching/cb/
col_namematching/id/
col_namematching/irmng/
col_namematching/vernacular/
col_namematching/vernacular/_2.fdt
col_namematching/vernacular/_2.fdx
col_namematching/vernacular/_2.fnm
col_namematching/vernacular/_2.si
col_namematching/vernacular/_2_Lucene41_0.doc
col_namematching/vernacular/_2_Lucene41_0.pos
col_namematching/vernacular/_2_Lucene41_0.tim
col_namematching/vernacular/_2_Lucene41_0.tip
col_namematching/vernacular/_2_nrm.cfe
col_namematching/vernacular/_2_nrm.cfs
col_namematching/vernacular/segments.gen
col_namematching/vernacular/segments_2
col_namematching/irmng/_7.fdt
col_namematching/irmng/_7.fdx
col_namematching/irmng/_7.fnm
col_namematching/irmng/_7.si
col_namematching/irmng/_7_Lucene41_0.doc
col_namematching/irmng/_7_Lucene41_0.pos
col_namematching/irmng/_7_Lucene41_0.tim
col_namematching/irmng/_7_Lucene41_0.tip
col_namematching/irmng/_7_nrm.cfe
col_namematching/irmng/_7_nrm.cfs
col_namematching/irmng/segments.gen
col_namematching/irmng/segments_4
col_namematching/id/_4.fdt
col_namematching/id/_4.fdx
col_namematching/id/_4.fnm
col_namematching/id/_4.si
col_namematching/id/_4_Lucene41_0.doc
col_namematching/id/_4_Lucene41_0.pos
col_namematching/id/_4_Lucene41_0.tim
col_namematching/id/_4_Lucene41_0.tip
col_namematching/id/_4_nrm.cfe
col_namematching/id/_4_nrm.cfs
col_namematching/id/segments.gen
col_namematching/id/segments_2
col_namematching/cb/_27.fdt

FATAL: all hosts have already failed -- aborting

PLAY RECAP ******************************************************************** 
           to retry, use: --limit @/home/mcarboni/ala-demo.retry

10.1.1.2                   : ok=44   changed=12   unreachable=0    failed=1   



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