Looking for JAR file that is responsible for DwC-A creation.
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
Hi Aaron
There is a DwC-A reader in the DarwinCore project on google code, but the creation is very tied to the IPT implementation here: http://code.google.com/p/gbif-providertoolkit/source/browse/trunk/gbif-ipt/s...
I doubt it will help you much I am afraid...
Cheers, Tim
On Sep 26, 2011, at 9:39 AM, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
Hi Tim,
Thanks for the reply.
I used the ConceptTerm interface and DwcTerm enum which took a lot of the work out making sure I was using correct identifiers. The main task was mapping our model to the appropriate concept term. After that I wrote some xml and csv files and hey presto - DwC-A :)
The reader classes were very handy for writing unit tests !
Regards, Aaron
On 10/19/2011 05:06 AM, Tim Robertson (GBIF) wrote:
Hi Aaron
There is a DwC-A reader in the DarwinCore project on google code, but the creation is very tied to the IPT implementation here: http://code.google.com/p/gbif-providertoolkit/source/browse/trunk/gbif-ipt/s...
I doubt it will help you much I am afraid...
Cheers, Tim
On Sep 26, 2011, at 9:39 AM, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
Hi Aaron, yes, please post any public code you have so people know about it. Thanks!
Markus
On 19.10.2011, at 04:07, Aaron Low wrote:
Hi Tim,
Thanks for the reply.
I used the ConceptTerm interface and DwcTerm enum which took a lot of the work out making sure I was using correct identifiers. The main task was mapping our model to the appropriate concept term. After that I wrote some xml and csv files and hey presto - DwC-A :)
The reader classes were very handy for writing unit tests !
Regards, Aaron
On 10/19/2011 05:06 AM, Tim Robertson (GBIF) wrote:
Hi Aaron
There is a DwC-A reader in the DarwinCore project on google code, but the creation is very tied to the IPT implementation here: http://code.google.com/p/gbif-providertoolkit/source/browse/trunk/gbif-ipt/s...
I doubt it will help you much I am afraid...
Cheers, Tim
On Sep 26, 2011, at 9:39 AM, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
-- Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
It seems the source is already up on google code :)
http://code.google.com/p/ala-citizenscience/source/browse/#svn%2Ftrunk%2Fsrc...
Regards, Aaron
On 10/19/2011 04:11 PM, "Markus Döring (GBIF)" wrote:
Hi Aaron, yes, please post any public code you have so people know about it. Thanks!
Markus
On 19.10.2011, at 04:07, Aaron Low wrote:
Hi Tim,
Thanks for the reply.
I used the ConceptTerm interface and DwcTerm enum which took a lot of the work out making sure I was using correct identifiers. The main task was mapping our model to the appropriate concept term. After that I wrote some xml and csv files and hey presto - DwC-A :)
The reader classes were very handy for writing unit tests !
Regards, Aaron
On 10/19/2011 05:06 AM, Tim Robertson (GBIF) wrote:
Hi Aaron
There is a DwC-A reader in the DarwinCore project on google code, but the creation is very tied to the IPT implementation here: http://code.google.com/p/gbif-providertoolkit/source/browse/trunk/gbif-ipt/s...
I doubt it will help you much I am afraid...
Cheers, Tim
On Sep 26, 2011, at 9:39 AM, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
-- Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
nice, thanks for sharing!
On 20.10.2011, at 03:09, Aaron Low wrote:
It seems the source is already up on google code :)
http://code.google.com/p/ala-citizenscience/source/browse/#svn%2Ftrunk%2Fsrc...
Regards, Aaron
On 10/19/2011 04:11 PM, "Markus Döring (GBIF)" wrote:
Hi Aaron, yes, please post any public code you have so people know about it. Thanks!
Markus
On 19.10.2011, at 04:07, Aaron Low wrote:
Hi Tim,
Thanks for the reply.
I used the ConceptTerm interface and DwcTerm enum which took a lot of the work out making sure I was using correct identifiers. The main task was mapping our model to the appropriate concept term. After that I wrote some xml and csv files and hey presto - DwC-A :)
The reader classes were very handy for writing unit tests !
Regards, Aaron
On 10/19/2011 05:06 AM, Tim Robertson (GBIF) wrote:
Hi Aaron
There is a DwC-A reader in the DarwinCore project on google code, but the creation is very tied to the IPT implementation here: http://code.google.com/p/gbif-providertoolkit/source/browse/trunk/gbif-ipt/s...
I doubt it will help you much I am afraid...
Cheers, Tim
On Sep 26, 2011, at 9:39 AM, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
-- Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
-- Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
Hi Aaron, unfortunately the archive generation inside the IPT does not exist as a separate library. Its rather tight to the IPT right now and not that easy to rip out I think. For this reason I started to write another small library while I was trying to export the species descriptions of the various wikipedias into dwc archives. Its also not entirely separate now, but I wouldn't mind making it a completely separate project.
The project is on github right now with the main class DwcaWriter here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
This writer is creating tab data files, the meta.xml descriptor and some xml metatda if demanded. The writer allows you to add core records one after the other while being able to add any number of extension records to the current core record. Once you are done with a record you simply call newRecord() and pass it a core id. At the very end you call finalize to write the meta.xml and bundle the archive.
The writer is being used here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
Sorry for the incomplete codebase, but its a side project I never had time to finish properly. If you like the idea Id be glad to move the dwca writer to a project on its own that we can both work on?
best, Markus
On 26.09.2011, at 09:39, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
Hi Markus,
Just to let you know that we are working on a similar module, within our Pensoft Writing Tool (PWT).
The question opened by Aaron reminded me to ask if anyone knows even a good DwC-A viewer, that is a tool that vizualises Darrin Core Archive files in a form of human readable table(s)?
Best regards, Lyubomir
On 19.10.2011 г. 00:14 ч., "Markus Döring (GBIF)" wrote:
Hi Aaron, unfortunately the archive generation inside the IPT does not exist as a separate library. Its rather tight to the IPT right now and not that easy to rip out I think. For this reason I started to write another small library while I was trying to export the species descriptions of the various wikipedias into dwc archives. Its also not entirely separate now, but I wouldn't mind making it a completely separate project.
The project is on github right now with the main class DwcaWriter here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
This writer is creating tab data files, the meta.xml descriptor and some xml metatda if demanded. The writer allows you to add core records one after the other while being able to add any number of extension records to the current core record. Once you are done with a record you simply call newRecord() and pass it a core id. At the very end you call finalize to write the meta.xml and bundle the archive.
The writer is being used here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
Sorry for the incomplete codebase, but its a side project I never had time to finish properly. If you like the idea Id be glad to move the dwca writer to a project on its own that we can both work on?
best, Markus
On 26.09.2011, at 09:39, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
Wanna work on a shared library? The dwca reader library actually already contains a DwcaWriter class which looks unfinished though. So I would propose to move my class from the wikipedia project there and its all neatly available in a small jar.
For visualisation Id be keen to know any good tool too. The only one Ive written is the dwca validator which shows the first 100 "star" records of an archive as a table. See bottom of an example report: http://tools.gbif.org/dwca-reports/286-7135712293886567122.html
Markus
On 18.10.2011, at 23:23, info@pensoft.net wrote:
Hi Markus,
Just to let you know that we are working on a similar module, within our Pensoft Writing Tool (PWT).
The question opened by Aaron reminded me to ask if anyone knows even a good DwC-A viewer, that is a tool that vizualises Darrin Core Archive files in a form of human readable table(s)?
Best regards, Lyubomir
On 19.10.2011 г. 00:14 ч., "Markus Döring (GBIF)" wrote:
Hi Aaron, unfortunately the archive generation inside the IPT does not exist as a separate library. Its rather tight to the IPT right now and not that easy to rip out I think. For this reason I started to write another small library while I was trying to export the species descriptions of the various wikipedias into dwc archives. Its also not entirely separate now, but I wouldn't mind making it a completely separate project.
The project is on github right now with the main class DwcaWriter here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
This writer is creating tab data files, the meta.xml descriptor and some xml metatda if demanded. The writer allows you to add core records one after the other while being able to add any number of extension records to the current core record. Once you are done with a record you simply call newRecord() and pass it a core id. At the very end you call finalize to write the meta.xml and bundle the archive.
The writer is being used here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
Sorry for the incomplete codebase, but its a side project I never had time to finish properly. If you like the idea Id be glad to move the dwca writer to a project on its own that we can both work on?
best, Markus
On 26.09.2011, at 09:39, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
-- Dr Lyubomir Penev Managing Director Pensoft Publishers 13a Geo Milev Street 1111 Sofia, Bulgaria Tel +359-2-8704281 Fax +359-2-8704282 www.pensoft.net www.pensoft.net/journals/zookeys www.pensoft.net/journals/phytokeys info@pensoft.net
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
Hi Markus,
Thanks for the reply. I've actually finished our basic implementation of DwC-A writing already.
I used the ConceptTerm interface and DwcTerm enum which took a lot of the work out making sure I was using correct identifiers. The main task was mapping our model to the appropriate concept term. After that I wrote some xml and csv files and hey presto - DwC-A :)
My implementation is coupled very closely to our own model, admittedly it's naive as it doesn't handle the relationship between core and extension records as your approach does.
Unfortunately I haven't been assigned to continue working on this feature of our system but if due to requirements we need to revisit our DwC implementation I will review your DwcaWriter.java code again. I remember have a look at it before but it didn't seem appropriate for some reason (sorry it was a few weeks ago) and I'll get back to you :)
The BDRS is on google code. When we push up our latest public build I'll put a link on this mailing list to the source of our implementation - I guess it might be useful to someone out there?
Regards, Aaron
On 10/19/2011 05:14 AM, "Markus Döring (GBIF)" wrote:
Hi Aaron, unfortunately the archive generation inside the IPT does not exist as a separate library. Its rather tight to the IPT right now and not that easy to rip out I think. For this reason I started to write another small library while I was trying to export the species descriptions of the various wikipedias into dwc archives. Its also not entirely separate now, but I wouldn't mind making it a completely separate project.
The project is on github right now with the main class DwcaWriter here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
This writer is creating tab data files, the meta.xml descriptor and some xml metatda if demanded. The writer allows you to add core records one after the other while being able to add any number of extension records to the current core record. Once you are done with a record you simply call newRecord() and pass it a core id. At the very end you call finalize to write the meta.xml and bundle the archive.
The writer is being used here: https://github.com/mdoering/wikipedia-dwca/blob/master/src/main/java/org/tdw...
Sorry for the incomplete codebase, but its a side project I never had time to finish properly. If you like the idea Id be glad to move the dwca writer to a project on its own that we can both work on?
best, Markus
On 26.09.2011, at 09:39, Aaron Low wrote:
Hi,
I'm a developer working on the BDRS - http://code.google.com/p/ala-citizenscience/.
I'm in the process of adding the ability to export observations of species as a darwin core archive. I've been perusing your code files at http://repository.gbif.org hoping to find a jar file that I can leverage some of the functionality of the IPT without having to run whole application. To achieve this I would like to include one (or more) of the org.gbif jars as a dependency in our maven build.
Unfortunately, I can't seem to find the jar that constructs a new archive.
Could someone please point me in the right direction? If the functionality I'm looking for doesn't exist, that would be great for me to know as well.
Thanks for your time,
Regards,
Aaron Low Gaia Resources p +61 8 9227 7309 w www.gaiaresources.com.au e aaron.low@gaiaresources.com.au
IPT mailing list IPT@lists.gbif.org http://lists.gbif.org/mailman/listinfo/ipt
participants (4)
-
"Markus Döring (GBIF)" -
Aaron Low -
info＠pensoft.net -
Tim Robertson (GBIF)